Initial Preparation¶
GitHub Login¶
Obtain a login at GitHub (https://github.com/) and send your login name so you can be added to the GO Organization (https://github.com/geneontology). This is our repository for ontology files and issue trackers.
Clone this repository¶
Visit https://github.com/geneontology/protege-tutorial
click “Clone or Download”
This will give you a URL you can use
git clone https://github.com/geneontology/protege-tutorial.git
These files will be under protege-tutorial
on your drive.
Install Protege 5 for Ontology Development¶
Download and install the latest version of Protege (5.1) for ontology development.
http://protege.stanford.edu/products.php#desktop-protege
The exercises assume that you have the tutorial directory checked out from GitHub. If for some reason you’re unable to do this, you can download individual files from: